CDS
Accession Number | TCMCG066C27661 |
gbkey | CDS |
Protein Id | XP_034602879.1 |
Location | complement(join(23679412..23679580,23679801..23679915,23680433..23680784,23680932..23681261,23681673..23681945,23682042..23682500,23683757..23683966,23684067..23684278,23685553..23685653,23686004..23686428,23686512..23686786,23686866..23687131,23687212..23687418,23687568..23687728,23687849..23688041,23689248..23689341,23689560..23689695,23690896..23691024,23691139..23691273,23691356..23691420,23692611..23692680,23693612..23693752,23694079..23694189,23694382..23694559,23695424..23695515)) |
Gene | LOC117863333 |
GeneID | 117863333 |
Organism | Setaria viridis |
Protein
Length | 1632aa |
Molecule type | protein |
Topology | linear |
Data_file_division | PLN |
dblink | BioProject:PRJNA633601 |
db_source | XM_034746988.1 |
Definition | endoribonuclease Dicer homolog 4 isoform X1 [Setaria viridis] |
EGGNOG-MAPPER Annotation
Sequence
CDS: ATGGGCGAGGGAGAAGACGAGGCCTCGAGCTCCGCCGCGGCGGCGAGCGCGGCCGCGGGCGGCCCCAAGGACCCGAGGAATATCGCGCGCAAGTATCAGCTGGATCTTTGCAAGAGGGCGGTTGAGGAGAACATCATAGTGTACCTTGGCACAGGATGTGGGAAGACACACATTGCTGTGTTACTCATGAATGAGCTTGGACACCTCATCCGCAAACCCAGCCGTGAGGTGTGCGTCTTCCTTGCACCGACCATTCCCCTTGTGCGCCAGCAAGCAACAGTGATTGCGGATTCCACCAATTTTAAAGTTCAATGTTACCATGGAAGCGGTAAAAACTTAAGAGACCACCAGGCATGGGAGAAAGAGATGGCCGAGTATGAGGTCCTTGTAATGATACCTCAAATATTATTGCGTAATTTGCGGCATTGTTTCATCAAGATGGATTCAATCGTACTTTTGGTATTTGATGAATGTCATCATGCACAAGCACAAAAAAGGCATCCATATGCGCAAATTATGAAGGAATTCTACAACAACGTTGATAAACCTCCTCGTGTCTTTGGCATGACTGCTTCACCAATTATTGGAAAAGGTGGGTCTAACAAGCTTACGTACACTAAATGTATCAATAGTCTTGAGGAATTACTTAATGCAAAGGTTTGTTCAATTGATAATGTAGAACTTGAAAGTGTGGTTGCTTCTCCTGATATTGAAGTGTACTTTTATGGCCCAGTTGGCCACTCTAACTTGACTGCAACTTACAGCAAAGGGCTTGATGGTTATAAGCTCCAGTCTGAATGCATGCTAAGAGAGAGCCTATGCAATTTCAAGGAGTCCCAGAAGAAACTGAAGACCTTGTGGAGGTTGCATGAAAATTTGATTTTCTGCTTGCAAGAAGTTGGTCTTTTTGGAGCTTTGCAAGCTGCAAGGACCTTTCTATCTTCTGGTGGTGGTAGTCTTGATAGAAAGGGGTTTGACATAAATGACAATCATGCCAGTTTTGTACAGCACTATCTACACAAAGCAATTTCTCTTCTAAGCTGCGACATATTAGATGGTGCTGATGCTGATTCTGTTGATCTGGAGACACTGGAGGAACCTTTATTCTCAAAAAAATTTGCAGTTCTTATTGACGTTCTGTCAAGATACAGGCTAGAGGAAAACATGAAGTGCATTGTTTTTGTGAAAAGAATCATTGTCGCAAGAGTAATCTCACATATTCTCCAAAACCTGAAGTGCCTTGATTTCTGGAAATGTGAGTGTCTTGTGGGATGCCACTCAGGATTGAAGAACATGTCAAGGAACAAGATGGGTTCTATCATTGAAAAGTTCTCTTCGGGTGAGGTGAACCTTTTGGTTGCTACTAGTGTAGGTGAGGAGGGACTTGACATTCAGACATGCTGCCTTGTTGTGCGGTTTGATCTCCCAGAAACTGTTTCTAGCTTTATCCAGTCAAGGGGACGTGCCCGGATGAGTAAATCTAAATACATTTTCCTCCTGGAGAGGGGAAACCAATCTCAGGAGAAGTTGCTTGGTGATTATATTACTGGCGAAAGTATTATGGATAAAGAGGTTAACTTGAGAACTTCAAATGATATGTTCGATTCCCTTGAGGAGAACATCTATCGAGTGAACAACACTGGTGCTTCCATTAGCACTGCTTGCAGTGTATCTCTATTACATTGCTATTGTGACAACCTTCCAAGAGATAGGTTTTTTTTTCCTTCTCCATCATTCTTCTATGTTGATGATGTTGAAGGAATAGTCTGCAGACTAATTCTCCCACCAAATGCTGCTTTTCGTCAAGTGAACAGTCAACCCTGTCCATCAAAAGATGAAGCTAAGAGAGATGCATGCTTGAAAGCATGCATAAGACTTCACGAACTGGGTGCTTTGACAGATTTTCTTCTGCCGGGCCAAGGCTCTAGAAAGACTAAGGTATCAACAACAGATATATTAGAAAGCAACAAAGCTGAGGATGAAAGTTTTAGGGAAGAACTTCATGAGATGTTGGTTCCTGCAGTTCTGAGATCTTCAAGATACAAACTGGACTGTTTGTTGAACTTGCATTTCTACTACATAGAATTTATTCCCAAACCAGCAGATAGACGATATCAGATGTTTGGTCTTTTTGTGATCGATGCCCTTCCAAAGGAAGCTGAAAAGTTGGATGTTGAATTGCATCTTGCACGTGCGAGGATTGTGAAAGCAGGAATTAAATATTTGGGAATGATTACTTTTAACAAAGAGGAGATGATGCTCGCACACAATTTCCAAGAAATGTTTTTGAAAGTTCTCTTGGACAGATCTGAGTTCACTTCATCTTATGTTATGTTGGGGAATGATACTGCGTTTCAAATGGATTCAACATTTTACCTGTTGCTTCCCATCAAACAGAAATTCTATGGTGATAAATTTATGATTGATTGGCCAGCAGTAAAGCGGTGCTTATCATCACCTGTATTTCAAGATCCAACGAGTTTATCTCTGCATGACTCATATTTGCCAAATGAGTCTTTGAAGCTTCTTGACGGAACATACAGTAAAGCTGATGTGATTGGCAGTTTGGTCTTCACTCCCCACAACAACCTGTTTTTCTTCGTTGATGACATTCTGGATGAAATAAATGGTAAAAGTGAATTCAACGGTGCAACTTATGCAGCACATTTTGAGGAAAGGTTTGATATCGAGCTATCCCATCCTGAACAGCCATTTTTGAGAGCAAAACAACTCTTCAATCTACGCAATCTGCTGCATAACCGACAACAAGAGAGCACAGAATCCGAGGGCCGTGAATTGATGGAGCACTTCGTGGAGTTACCTCCAGAGCTATGCTCTTTGAAGATAACTGGGTTCTCAAAAGATATGGGTAGTTCTTTGTCCTTGCTACCGTCTTTAATGTGTCACTTGGAGAATTTGTTGGTGGCTCTCGAGTTGAAGGATGTCATGTTATCTTATTTCCCAGAGGCTTCTCAAATTAGTGCTTCTGGTATCCTTGAAGCGCTGACTACTGAAAGGTGTTTGGAGAGGATCTCGTTGGAGCGATTTGAAGTCCTAGGTGATGCTTTCTTGAAGTATGTAGTTGGGCGCCATAACTTTATTTCATATGAAGGACTTGATGAAGATCAGTTGACCAGGAGACGTTCTGATATAGTGAATAATTCAAATTTATATGAGTTATCAATTAGAAGAAATTTGCAGGTATACATACGGGATCAACAGTTTGAACCTACTCAGTTCTATGCACTGGGAAGGCCATGTAAAGTGGTTTGCAATCCTGAAACAGAAGCGAGTTTACACCCGAAGAATATCGACCCAGATAAGCGAGACAACTGTAACTTGAGGTGTACAAAGTCACATCATTGGTTGCATAGAAAGACGATTGCAGATGTTGTTGAGTCACTTCTTGGAGCATTTATTGTTGAGAGTGGATTCAAAGCTGCATTTGCATTCCTAAATTGGATGGGAATAAAAGTTGATTTTAAAGATGATGCTCTCTATAGAGTATTAGACGCAAGCTCGGCCAATTTGTCTCTCATGGATTACATCAACATTTCTGAGCTTGAAGAATTGATAGGTTACAAATTCAAGCACAAGGGTTTACTTCTCCAAGCATTTGTACACCCTTCATTCAATAAACATTCTGGAGGATGCTACCAGAGGATGGAGTTCCTTGGAGATGCTGTTTTGGAATATTTGATGGTCTCATACCTCTACTCTGCTTACCCAGATCTCAAGCCTGGTCAAATAACAGATCTGAAATCATTAGCTGTCAATAACACTTCATTTGCTTATGTAGCAATTAAGAAATCTATGCATAAGTATCTTATAAAGGATTCTAAATATCTTATGGCAGCGGTAAATAAATTTGAGAATTATTTTAATCTTTCCAATTCAGAGAAAGATTTGTCAGAAGAACCAGCATGTCCAAAGGTTCTTGGTGATATTGTTGAGTCTTGTGTTGGTGCAGTGCTTTTAGATTCCGGCTTCAACCTGAACCATGCTTGGAAGCTAATGCTAATGCTTCTAAAGCCAATATTGAGCTTCTGTGACATGCACATAAATCCTCTGAGAGAACTCCGTGAACTTTGTCAATGTAATGGTTTTGACTTAGGCCTTCCCAAACCTATTAAGGCTGATGGAGAGTTCCATGTCAAAGTGGAAGTTAACGTAAACGGCAAGATGATAAGTTGTACAGCAGCAAACCGGAATTCAAAACACGCTAGAAAGTTGGCTGCACAAGATACACTTTCTAAACTGAAGAATTATGGATACAAGCATAAGAGCAAATCACTGGAGGAGATTTTGCGTACTGCCACAAAAAAAGAACCAGAATTAATAGGCTATGATGAAGAACCAATCAAAGTTGATGGCGTACCTTTAGAAATGAAGAATCTACAGATGAATGGAGAAATGGAGGAAAACATCTTTTTTGGAAATAATGAAGCATTTTTCATTGGGAGGTCTGCAACCTCCATTCAGAGAACAGGAGAAGACAACAAGGTTGACAGGAATTATGCCAATAATGGAAGGATCAATAAGTCCAATGTGGTTACGCAGAATGGTTGTCTACCTAGAGGGGAAGCTGCTAAAATAAACAAAAAAGAGTATCATGGTGATATGGTACACAAAACAGCAAGGTCATTCCTTTATGAACTATGTGCTGCAAACTATTGGAAACCTCCTGAATTTGAGTTATGCAAAGACGAAGGACCAAGTCACCTTCGAAAGTTCACTTGCAAGGTCCTTGTTCAGATCATGGGACCTTCAGCGACTCTTTTGGAGTGCTACAGCGATCCCAAGCTACAAAAGAGAGCCGCTCAGGAGCATGCCGCCCAGGGGGCTCTCTGGTGCCTCAAGCAACTTGGATACCTCCCAAAAGATGAAACTCGTGTCTAG |
Protein: MGEGEDEASSSAAAASAAAGGPKDPRNIARKYQLDLCKRAVEENIIVYLGTGCGKTHIAVLLMNELGHLIRKPSREVCVFLAPTIPLVRQQATVIADSTNFKVQCYHGSGKNLRDHQAWEKEMAEYEVLVMIPQILLRNLRHCFIKMDSIVLLVFDECHHAQAQKRHPYAQIMKEFYNNVDKPPRVFGMTASPIIGKGGSNKLTYTKCINSLEELLNAKVCSIDNVELESVVASPDIEVYFYGPVGHSNLTATYSKGLDGYKLQSECMLRESLCNFKESQKKLKTLWRLHENLIFCLQEVGLFGALQAARTFLSSGGGSLDRKGFDINDNHASFVQHYLHKAISLLSCDILDGADADSVDLETLEEPLFSKKFAVLIDVLSRYRLEENMKCIVFVKRIIVARVISHILQNLKCLDFWKCECLVGCHSGLKNMSRNKMGSIIEKFSSGEVNLLVATSVGEEGLDIQTCCLVVRFDLPETVSSFIQSRGRARMSKSKYIFLLERGNQSQEKLLGDYITGESIMDKEVNLRTSNDMFDSLEENIYRVNNTGASISTACSVSLLHCYCDNLPRDRFFFPSPSFFYVDDVEGIVCRLILPPNAAFRQVNSQPCPSKDEAKRDACLKACIRLHELGALTDFLLPGQGSRKTKVSTTDILESNKAEDESFREELHEMLVPAVLRSSRYKLDCLLNLHFYYIEFIPKPADRRYQMFGLFVIDALPKEAEKLDVELHLARARIVKAGIKYLGMITFNKEEMMLAHNFQEMFLKVLLDRSEFTSSYVMLGNDTAFQMDSTFYLLLPIKQKFYGDKFMIDWPAVKRCLSSPVFQDPTSLSLHDSYLPNESLKLLDGTYSKADVIGSLVFTPHNNLFFFVDDILDEINGKSEFNGATYAAHFEERFDIELSHPEQPFLRAKQLFNLRNLLHNRQQESTESEGRELMEHFVELPPELCSLKITGFSKDMGSSLSLLPSLMCHLENLLVALELKDVMLSYFPEASQISASGILEALTTERCLERISLERFEVLGDAFLKYVVGRHNFISYEGLDEDQLTRRRSDIVNNSNLYELSIRRNLQVYIRDQQFEPTQFYALGRPCKVVCNPETEASLHPKNIDPDKRDNCNLRCTKSHHWLHRKTIADVVESLLGAFIVESGFKAAFAFLNWMGIKVDFKDDALYRVLDASSANLSLMDYINISELEELIGYKFKHKGLLLQAFVHPSFNKHSGGCYQRMEFLGDAVLEYLMVSYLYSAYPDLKPGQITDLKSLAVNNTSFAYVAIKKSMHKYLIKDSKYLMAAVNKFENYFNLSNSEKDLSEEPACPKVLGDIVESCVGAVLLDSGFNLNHAWKLMLMLLKPILSFCDMHINPLRELRELCQCNGFDLGLPKPIKADGEFHVKVEVNVNGKMISCTAANRNSKHARKLAAQDTLSKLKNYGYKHKSKSLEEILRTATKKEPELIGYDEEPIKVDGVPLEMKNLQMNGEMEENIFFGNNEAFFIGRSATSIQRTGEDNKVDRNYANNGRINKSNVVTQNGCLPRGEAAKINKKEYHGDMVHKTARSFLYELCAANYWKPPEFELCKDEGPSHLRKFTCKVLVQIMGPSATLLECYSDPKLQKRAAQEHAAQGALWCLKQLGYLPKDETRV |